{
  "_id": "6a2121bbcd65a98ecbd1f539",
  "Package": "ggvolcano",
  "Title": "Publication-Ready Volcano Plots",
  "Version": "0.1.4",
  "Authors@R": "person('Yaoxiang', 'Li', email = 'liyaoxiang@outlook.com', role = c('cre', 'aut'))",
  "Description": "Provides publication-ready volcano plots for visualizing\ndifferential expression results, commonly used in RNA-seq and\nsimilar analyses. This tool helps create high-quality visual\nrepresentations of data using the 'ggplot2' framework Wickham\n(2016) <doi:10.1007/978-3-319-24277-4>.",
  "License": "MIT + file LICENSE",
  "Encoding": "UTF-8",
  "RoxygenNote": "7.3.2",
  "VignetteBuilder": "knitr",
  "Config/pak/sysreqs": "cmake make libuv1-dev zlib1g-dev",
  "Repository": "https://yaoxiangli.r-universe.dev",
  "Date/Publication": "2026-05-05 07:33:42 UTC",
  "RemoteUrl": "https://github.com/yaoxiangli/ggvolcano",
  "RemoteRef": "HEAD",
  "RemoteSha": "b9e6e60ad61835cb25ecae191b3364f613504db4",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-04 06:53:56 UTC",
    "User": "root"
  },
  "Author": "Yaoxiang Li [cre, aut]",
  "Maintainer": "Yaoxiang Li <liyaoxiang@outlook.com>",
  "MD5sum": "20a41544577bf74c08c9c86e6f3a1449",
  "_user": "yaoxiangli",
  "_type": "src",
  "_file": "ggvolcano_0.1.4.tar.gz",
  "_fileid": "630cf92f456e628490d8df2ef35405a2bca924b25c7387cd327507ee838905a5",
  "_filesize": 1232809,
  "_sha256": "630cf92f456e628490d8df2ef35405a2bca924b25c7387cd327507ee838905a5",
  "_created": "2026-06-04T06:53:56.000Z",
  "_published": "2026-06-04T06:56:59.765Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79465749680,
      "time": 134,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7404967735"
    },
    {
      "job": 79465749690,
      "time": 137,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7404968877"
    },
    {
      "job": 79465749699,
      "time": 145,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7404970878"
    },
    {
      "job": 79465749687,
      "time": 120,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7404964719"
    },
    {
      "job": 79465243820,
      "time": 233,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7404933180"
    },
    {
      "job": 79465749685,
      "time": 115,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7404963378"
    },
    {
      "job": 79465749751,
      "time": 103,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7404960096"
    },
    {
      "job": 79465749747,
      "time": 99,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7404959293"
    },
    {
      "job": 79465749715,
      "time": 98,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7404958845"
    }
  ],
  "_buildurl": "https://github.com/r-universe/yaoxiangli/actions/runs/26935814680",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/yaoxiangli/ggvolcano",
  "_commit": {
    "id": "b9e6e60ad61835cb25ecae191b3364f613504db4",
    "author": "Yaoxiang Li <liyaoxiang@outlook.com>",
    "committer": "Yaoxiang Li <liyaoxiang@outlook.com>",
    "message": "Add golem Shiny interface\n",
    "time": 1777966422
  },
  "_maintainer": {
    "name": "Yaoxiang Li",
    "email": "liyaoxiang@outlook.com",
    "login": "yaoxiangli",
    "description": "The most beautiful thing we can experience is the mysterious. It is the source of all true art and science.",
    "uuid": 18198096
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "config",
      "version": ">= 0.3.2",
      "role": "Imports"
    },
    {
      "package": "ggplot2",
      "role": "Imports"
    },
    {
      "package": "ggrepel",
      "role": "Imports"
    },
    {
      "package": "golem",
      "version": ">= 0.4.1",
      "role": "Imports"
    },
    {
      "package": "shiny",
      "version": ">= 1.8.1.1",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "yaoxiangli",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-19",
      "n": 1
    }
  ],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "yaoxiangli",
      "count": 2,
      "uuid": 18198096
    }
  ],
  "_userbio": {
    "uuid": 18198096,
    "type": "user",
    "name": "Yaoxiang Li",
    "description": "The most beautiful thing we can experience is the mysterious. It is the source of all true art and science."
  },
  "_downloads": {
    "count": 287,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/ggvolcano"
  },
  "_devurl": "https://github.com/yaoxiangli/ggvolcano",
  "_searchresults": 75,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/ggvolcano.html",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/yaoxiangli/ggvolcano",
  "_realowner": "yaoxiangli",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.3",
      "date": "2024-09-05"
    },
    {
      "version": "0.1.4",
      "date": "2025-02-09"
    }
  ],
  "_exports": [
    "ggvolcano",
    "run_app"
  ],
  "_help": [
    {
      "page": "ggvolcano",
      "title": "Publication-ready volcano plots",
      "topics": [
        "ggvolcano"
      ]
    },
    {
      "page": "run_app",
      "title": "Run the Shiny Application",
      "topics": [
        "run_app"
      ]
    }
  ],
  "_readme": "https://github.com/yaoxiangli/ggvolcano/raw/HEAD/README.md",
  "_rundeps": [
    "attempt",
    "base64enc",
    "bslib",
    "cachem",
    "cli",
    "commonmark",
    "config",
    "cpp11",
    "digest",
    "farver",
    "fastmap",
    "fontawesome",
    "fs",
    "ggplot2",
    "ggrepel",
    "glue",
    "golem",
    "gtable",
    "here",
    "htmltools",
    "httpuv",
    "isoband",
    "jquerylib",
    "jsonlite",
    "labeling",
    "later",
    "lifecycle",
    "magrittr",
    "memoise",
    "mime",
    "otel",
    "promises",
    "R6",
    "rappdirs",
    "RColorBrewer",
    "Rcpp",
    "rlang",
    "rprojroot",
    "S7",
    "sass",
    "scales",
    "shiny",
    "sourcetools",
    "vctrs",
    "viridisLite",
    "withr",
    "xtable",
    "yaml"
  ],
  "_vignettes": [
    {
      "source": "ggvolcano-examples.Rmd",
      "filename": "ggvolcano-examples.html",
      "title": "Using ggvolcano for Publication-Ready Volcano Plots",
      "author": "Yaoxiang Li",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Example 1: Basic Volcano Plot",
        "Example 2: Volcano Plot with Custom Point Aesthetics",
        "Example 3: Volcano Plot with Color Gradient",
        "Example 4: Volcano Plot with Custom Labels and Connectors",
        "Example 5: Volcano Plot with Custom Gridlines and Full Border",
        "Example 6: Volcano Plot with an Additional Horizontal Line",
        "Example 7: Volcano Plot with Custom Axis Labels and Subtitle",
        "Example 8: Volcano Plot with a Custom Legend"
      ],
      "created": "2025-02-09 06:25:29",
      "modified": "2025-02-09 06:25:29",
      "commits": 1
    }
  ],
  "_score": 4.574031267727719,
  "_indexed": true,
  "_nocasepkg": "ggvolcano",
  "_universes": [
    "yaoxiangli"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.4",
      "date": "2026-06-04T06:56:06.000Z",
      "distro": "noble",
      "commit": "b9e6e60ad61835cb25ecae191b3364f613504db4",
      "fileid": "8c0b3d8a5958126300274a0a8b63567327fcd1010e1b173551fa25940cde3911",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/yaoxiangli/actions/runs/26935814680"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.4",
      "date": "2026-06-04T06:56:07.000Z",
      "distro": "noble",
      "commit": "b9e6e60ad61835cb25ecae191b3364f613504db4",
      "fileid": "1e2f7aea036b728187bcb7715ff3764d8e60151fb23b491c2588a0dfef429075",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/yaoxiangli/actions/runs/26935814680"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.4",
      "date": "2026-06-04T06:56:11.000Z",
      "commit": "b9e6e60ad61835cb25ecae191b3364f613504db4",
      "fileid": "d0ce804eafb84228a0b9a9a428219c91055115632ddc54bcf3b0a45110cadf20",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/yaoxiangli/actions/runs/26935814680"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.4",
      "date": "2026-06-04T06:55:53.000Z",
      "commit": "b9e6e60ad61835cb25ecae191b3364f613504db4",
      "fileid": "672c464c7a2027dd58280b2d4cd9acc2a0e478ab6d17f28a2aa89be008228487",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/yaoxiangli/actions/runs/26935814680"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.4",
      "date": "2026-06-04T06:56:10.000Z",
      "commit": "b9e6e60ad61835cb25ecae191b3364f613504db4",
      "fileid": "dc2c1d2e988cc8c432de5974edeb6fff73abba86ec8d6ce46977794a462f4187",
      "status": "success",
      "buildurl": "https://github.com/r-universe/yaoxiangli/actions/runs/26935814680"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.4",
      "date": "2026-06-04T06:55:27.000Z",
      "commit": "b9e6e60ad61835cb25ecae191b3364f613504db4",
      "fileid": "4a3541755812e9ad0a53a40b525eb74e730b37c78ac093ad7ee46fbe858b91ba",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/yaoxiangli/actions/runs/26935814680"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.4",
      "date": "2026-06-04T06:55:22.000Z",
      "commit": "b9e6e60ad61835cb25ecae191b3364f613504db4",
      "fileid": "05b544b147f47cd04cac88a1d0e830a81a166ac69b3f6e515d10ddbd050d22b9",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/yaoxiangli/actions/runs/26935814680"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.1.4",
      "date": "2026-06-04T06:55:21.000Z",
      "commit": "b9e6e60ad61835cb25ecae191b3364f613504db4",
      "fileid": "adf6802a2a04a0ce4c9f39cb7f2d94c081880d2243b0ceeff327cf72612b9ed6",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/yaoxiangli/actions/runs/26935814680"
    }
  ]
}