{
  "_id": "6a489d69e06c18f0a6543445",
  "Package": "ggvolcano",
  "Title": "Publication-Ready Volcano Plots",
  "Version": "0.1.4",
  "Authors@R": "person('Yaoxiang', 'Li', email = 'liyaoxiang@outlook.com', role = c('cre', 'aut'))",
  "Description": "Provides publication-ready volcano plots for visualizing\ndifferential expression results, commonly used in RNA-seq and\nsimilar analyses. This tool helps create high-quality visual\nrepresentations of data using the 'ggplot2' framework Wickham\n(2016) <doi:10.1007/978-3-319-24277-4>.",
  "License": "MIT + file LICENSE",
  "Encoding": "UTF-8",
  "RoxygenNote": "7.3.2",
  "VignetteBuilder": "knitr",
  "Config/pak/sysreqs": "cmake make libuv1-dev zlib1g-dev",
  "Repository": "https://yaoxiangli.r-universe.dev",
  "Date/Publication": "2026-05-05 07:33:42 UTC",
  "RemoteUrl": "https://github.com/yaoxiangli/ggvolcano",
  "RemoteRef": "HEAD",
  "RemoteSha": "b9e6e60ad61835cb25ecae191b3364f613504db4",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-07-04 05:28:04 UTC",
    "User": "root"
  },
  "Author": "Yaoxiang Li [cre, aut]",
  "Maintainer": "Yaoxiang Li <liyaoxiang@outlook.com>",
  "_user": "yaoxiangli",
  "_type": "src",
  "_file": "ggvolcano_0.1.4.tar.gz",
  "_fileid": "https://r2.ropensci.org/a7f7766c621e68f8512a4f41dde50358736f2f26604ffc49166abbd349750c16",
  "_filesize": 1232500,
  "_sha256": "a7f7766c621e68f8512a4f41dde50358736f2f26604ffc49166abbd349750c16",
  "_expires": "2026-10-12T05:43:03.000Z",
  "_created": "2026-07-04T05:28:04.000Z",
  "_published": "2026-07-04T05:43:05.048Z",
  "_jobs": [
    {
      "job": 85106217416,
      "time": 147,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8078688393"
    },
    {
      "job": 85106217429,
      "time": 140,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8078687666"
    },
    {
      "job": 85106217415,
      "time": 120,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8078771627"
    },
    {
      "job": 85106217435,
      "time": 92,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8078775964"
    },
    {
      "job": 85106041981,
      "time": 166,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8078671816"
    },
    {
      "job": 85106217396,
      "time": 139,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "8078687452"
    },
    {
      "job": 85106217439,
      "time": 80,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8078680532"
    },
    {
      "job": 85106217413,
      "time": 91,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8078681804"
    },
    {
      "job": 85106217430,
      "time": 81,
      "config": "windows-release",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8078680786"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/yaoxiangli/actions/runs/28696186496",
  "_status": "success",
  "_upstream": "https://github.com/yaoxiangli/ggvolcano",
  "_commit": {
    "id": "b9e6e60ad61835cb25ecae191b3364f613504db4",
    "author": "Yaoxiang Li <liyaoxiang@outlook.com>",
    "committer": "Yaoxiang Li <liyaoxiang@outlook.com>",
    "message": "Add golem Shiny interface\n",
    "time": 1777966422
  },
  "_maintainer": {
    "name": "Yaoxiang Li",
    "email": "liyaoxiang@outlook.com",
    "login": "yaoxiangli",
    "description": "The most beautiful thing we can experience is the mysterious. It is the source of all true art and science.",
    "uuid": 18198096
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "config",
      "version": ">= 0.3.2",
      "role": "Imports"
    },
    {
      "package": "ggplot2",
      "role": "Imports"
    },
    {
      "package": "ggrepel",
      "role": "Imports"
    },
    {
      "package": "golem",
      "version": ">= 0.4.1",
      "role": "Imports"
    },
    {
      "package": "shiny",
      "version": ">= 1.8.1.1",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "yaoxiangli",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-19",
      "n": 1
    }
  ],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "yaoxiangli",
      "count": 2,
      "uuid": 18198096
    }
  ],
  "_userbio": {
    "uuid": 18198096,
    "type": "user",
    "name": "Yaoxiang Li",
    "followers": 43,
    "description": "The most beautiful thing we can experience is the mysterious. It is the source of all true art and science."
  },
  "_downloads": {
    "count": 607,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/ggvolcano"
  },
  "_devurl": "https://github.com/yaoxiangli/ggvolcano",
  "_searchresults": 76,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/ggvolcano.html",
    "extra/readme.html",
    "extra/readme.md",
    "LICENSE",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/yaoxiangli/ggvolcano",
  "_realowner": "yaoxiangli",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.3",
      "date": "2024-09-05"
    },
    {
      "version": "0.1.4",
      "date": "2025-02-09"
    }
  ],
  "_exports": [
    "ggvolcano",
    "run_app"
  ],
  "_help": [
    {
      "page": "ggvolcano",
      "title": "Publication-ready volcano plots",
      "topics": [
        "ggvolcano"
      ]
    },
    {
      "page": "run_app",
      "title": "Run the Shiny Application",
      "topics": [
        "run_app"
      ]
    }
  ],
  "_readme": "https://github.com/yaoxiangli/ggvolcano/raw/HEAD/README.md",
  "_rundeps": [
    "attempt",
    "base64enc",
    "bslib",
    "cachem",
    "cli",
    "codetools",
    "commonmark",
    "config",
    "cpp11",
    "digest",
    "farver",
    "fastmap",
    "fontawesome",
    "fs",
    "ggplot2",
    "ggrepel",
    "glue",
    "golem",
    "gtable",
    "htmltools",
    "httpuv",
    "isoband",
    "jquerylib",
    "jsonlite",
    "labeling",
    "later",
    "lifecycle",
    "magrittr",
    "memoise",
    "mime",
    "otel",
    "promises",
    "R6",
    "rappdirs",
    "RColorBrewer",
    "Rcpp",
    "rlang",
    "S7",
    "sass",
    "scales",
    "shiny",
    "sourcetools",
    "vctrs",
    "viridisLite",
    "withr",
    "xtable",
    "yaml"
  ],
  "_vignettes": [
    {
      "source": "ggvolcano-examples.Rmd",
      "filename": "ggvolcano-examples.html",
      "title": "Using ggvolcano for Publication-Ready Volcano Plots",
      "author": "Yaoxiang Li",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Example 1: Basic Volcano Plot",
        "Example 2: Volcano Plot with Custom Point Aesthetics",
        "Example 3: Volcano Plot with Color Gradient",
        "Example 4: Volcano Plot with Custom Labels and Connectors",
        "Example 5: Volcano Plot with Custom Gridlines and Full Border",
        "Example 6: Volcano Plot with an Additional Horizontal Line",
        "Example 7: Volcano Plot with Custom Axis Labels and Subtitle",
        "Example 8: Volcano Plot with a Custom Legend"
      ],
      "created": "2025-02-09 06:25:29",
      "modified": "2025-02-09 06:25:29",
      "commits": 1
    }
  ],
  "_score": 4.57978359661681,
  "_indexed": true,
  "_nocasepkg": "ggvolcano",
  "_universes": [
    "yaoxiangli"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.4",
      "date": "2026-07-04T05:30:18.000Z",
      "distro": "resolute",
      "commit": "b9e6e60ad61835cb25ecae191b3364f613504db4",
      "fileid": "https://r2.ropensci.org/042bbf7ff6ac03fab7484d0bd7c55f456d7495f7d1e0a0ecc5932faabea7a687",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/yaoxiangli/actions/runs/28696186496"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.1.4",
      "date": "2026-07-04T05:30:12.000Z",
      "distro": "resolute",
      "commit": "b9e6e60ad61835cb25ecae191b3364f613504db4",
      "fileid": "https://r2.ropensci.org/fa99a22d75bdda3d4e97ef8bea11ea7df78e860a89037f21382b0623c9824632",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/yaoxiangli/actions/runs/28696186496"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.4",
      "date": "2026-07-04T05:41:47.000Z",
      "commit": "b9e6e60ad61835cb25ecae191b3364f613504db4",
      "fileid": "https://r2.ropensci.org/d07a5437fb0318b1ba7bd2f99b63274e6396bd960d1f6be3b924139ca9d8326d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/yaoxiangli/actions/runs/28696186496"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.1.4",
      "date": "2026-07-04T05:42:28.000Z",
      "commit": "b9e6e60ad61835cb25ecae191b3364f613504db4",
      "fileid": "https://r2.ropensci.org/1d18107512a1f59b98108df1d8be85390e8bb2453373f75cb2af5a909fb29413",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/yaoxiangli/actions/runs/28696186496"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.4",
      "date": "2026-07-04T05:30:35.000Z",
      "commit": "b9e6e60ad61835cb25ecae191b3364f613504db4",
      "fileid": "https://r2.ropensci.org/d862dd60eac24f9ea7d7fe2a282c09261d38fdddb5ec8eedfd20ce02595eff9e",
      "status": "success",
      "buildurl": "https://github.com/r-universe/yaoxiangli/actions/runs/28696186496"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.4",
      "date": "2026-07-04T05:29:08.000Z",
      "commit": "b9e6e60ad61835cb25ecae191b3364f613504db4",
      "fileid": "https://r2.ropensci.org/19fa3e486486f56355dc510e18c1c695a81819fae6c683583055e1923dd62a3d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/yaoxiangli/actions/runs/28696186496"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.4",
      "date": "2026-07-04T05:29:18.000Z",
      "commit": "b9e6e60ad61835cb25ecae191b3364f613504db4",
      "fileid": "https://r2.ropensci.org/33120ce800377367323cbff75ac452565f668946802e0aab72debb61306e3e77",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/yaoxiangli/actions/runs/28696186496"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "0.1.4",
      "date": "2026-07-04T05:29:10.000Z",
      "commit": "b9e6e60ad61835cb25ecae191b3364f613504db4",
      "fileid": "https://r2.ropensci.org/a69d01418cc52bd997d477462e14236b6caf35fb05461fc9a89caf9215606d90",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/yaoxiangli/actions/runs/28696186496"
    }
  ]
}